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Species belonging to selected taxon:
Cynodon dactylon
,
Eragrostis curvula
,
Panicum virgatum
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Cenchrus ciliaris
,
Zea mays
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST045230
species:
Saccharum officinarum
miRNA family:
MIR444
source:
microPC, original name:
miR444
Taxonomy by NCBI:
Saccharum officinarum
Saccharum officinarum complex
Saccharum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCAGTTGTTGTCTCAAGCTT
miRNA*
GCTAGAGGCAGCAACTGCATA
mismatches:
1
bulges:
0
View larger
pre-miRNA
AA
GCTAGAGGCAGCAACTGCATA
TCTTGCAAGAAAATTGGTTTTCGAACCATACCGATAATTTTCTTGCANGTTG
TGCAGTTGTTGTCTCAAGCTT
dot-bracket secondary structure
((
(((.(((((((((((((((((
...(((((((((((((....(((........))))))))))))))))...))
))))))))))))))).)))))
SIMILARITIES
miRBase
ssp-MIR444c
:
8e-48
PMRD
pvi-miR444
:
3e-38
microPC
miR444
:
8e-48
UniProt
no hits
RFAM
MIR444: 5e-46
MORE
miRNEST target predictions
non-miRNEST targets: none
download this record